BMRB Entry 11427

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11427

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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

NMR assignments of ubiquitin fold domain (UFD) in SUMO-activating enzyme subunit 2 from rice

Deposition date:

2011-02-10

Original release date:

2011-05-29

Authors:

Suzuki, Rintaro; Tsuchiya, Wataru; Shindo, Heisaburo; Yamazaki, Toshimasa

Citation:

Citation: Suzuki, Rintaro; Tsuchiya, Wataru; Shindo, Heisaburo; Yamazaki, Toshimasa. "NMR assignments of ubiquitin fold domain (UFD) in SUMO-activating enzyme subunit 2 from rice." Biomol. NMR Assignments ., .-. (2011).
PubMed: 21523438

Assembly members:

Assembly members:
SAE2, polymer, 120 residues, Formula weight is not available

Natural source:

Natural source: Common Name: rice Taxonomy ID: 4530 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Oryza sativa

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pGEX-6P-3

Entity Sequences (FASTA):

Entity Sequences (FASTA):
SAE2: GPLGSSETPLLLEVNTKTTK LREVIEKIIKSKLGMNLPLV MIGSTLVFEDGEGLEEDEAA NYALNLEKVLAELPAPVVND TKLTVEDFQQELSCSINIKH RDEFDEEKEPDGMVLSGWSA

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	542
15N chemical shifts	124
1H chemical shifts	865

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	SAE2	1

Entities:

Entity 1, SAE2 120 residues - Formula weight is not available

Residues 431-435 represent a non-native sequence from affinity tag.

1	GLY	PRO	LEU	GLY	SER	SER	GLU	THR	PRO	LEU
2	LEU	LEU	GLU	VAL	ASN	THR	LYS	THR	THR	LYS
3	LEU	ARG	GLU	VAL	ILE	GLU	LYS	ILE	ILE	LYS
4	SER	LYS	LEU	GLY	MET	ASN	LEU	PRO	LEU	VAL
5	MET	ILE	GLY	SER	THR	LEU	VAL	PHE	GLU	ASP
6	GLY	GLU	GLY	LEU	GLU	GLU	ASP	GLU	ALA	ALA
7	ASN	TYR	ALA	LEU	ASN	LEU	GLU	LYS	VAL	LEU
8	ALA	GLU	LEU	PRO	ALA	PRO	VAL	VAL	ASN	ASP
9	THR	LYS	LEU	THR	VAL	GLU	ASP	PHE	GLN	GLN
10	GLU	LEU	SER	CYS	SER	ILE	ASN	ILE	LYS	HIS
11	ARG	ASP	GLU	PHE	ASP	GLU	GLU	LYS	GLU	PRO
12	ASP	GLY	MET	VAL	LEU	SER	GLY	TRP	SER	ALA

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_2	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D HNHB	sample_2	isotropic	sample_conditions_1
3D HCACO	sample_2	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_2	isotropic	sample_conditions_1
3D C(CO)NH	sample_2	isotropic	sample_conditions_1
3D H(CCO)NH	sample_2	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_2	isotropic	sample_conditions_1
3D 15N-separated NOESY-HSQC	sample_1	isotropic	sample_conditions_1
3D 13C/15N-separated NOESY-HSQC	sample_1	isotropic	sample_conditions_1
3D 13C-separated NOESY-HSQC	sample_2	isotropic	sample_conditions_1

BMRB Entry 11427

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	PRO	LEU	GLY	SER	SER	GLU	THR	PRO	LEU
2	LEU	LEU	GLU	VAL	ASN	THR	LYS	THR	THR	LYS
3	LEU	ARG	GLU	VAL	ILE	GLU	LYS	ILE	ILE	LYS
4	SER	LYS	LEU	GLY	MET	ASN	LEU	PRO	LEU	VAL
5	MET	ILE	GLY	SER	THR	LEU	VAL	PHE	GLU	ASP
6	GLY	GLU	GLY	LEU	GLU	GLU	ASP	GLU	ALA	ALA
7	ASN	TYR	ALA	LEU	ASN	LEU	GLU	LYS	VAL	LEU
8	ALA	GLU	LEU	PRO	ALA	PRO	VAL	VAL	ASN	ASP
9	THR	LYS	LEU	THR	VAL	GLU	ASP	PHE	GLN	GLN
10	GLU	LEU	SER	CYS	SER	ILE	ASN	ILE	LYS	HIS
11	ARG	ASP	GLU	PHE	ASP	GLU	GLU	LYS	GLU	PRO
12	ASP	GLY	MET	VAL	LEU	SER	GLY	TRP	SER	ALA

1	GLY	PRO	LEU	GLY	SER	SER	GLU	THR	PRO	LEU
2	LEU	LEU	GLU	VAL	ASN	THR	LYS	THR	THR	LYS
3	LEU	ARG	GLU	VAL	ILE	GLU	LYS	ILE	ILE	LYS
4	SER	LYS	LEU	GLY	MET	ASN	LEU	PRO	LEU	VAL
5	MET	ILE	GLY	SER	THR	LEU	VAL	PHE	GLU	ASP
6	GLY	GLU	GLY	LEU	GLU	GLU	ASP	GLU	ALA	ALA
7	ASN	TYR	ALA	LEU	ASN	LEU	GLU	LYS	VAL	LEU
8	ALA	GLU	LEU	PRO	ALA	PRO	VAL	VAL	ASN	ASP
9	THR	LYS	LEU	THR	VAL	GLU	ASP	PHE	GLN	GLN
10	GLU	LEU	SER	CYS	SER	ILE	ASN	ILE	LYS	HIS
11	ARG	ASP	GLU	PHE	ASP	GLU	GLU	LYS	GLU	PRO
12	ASP	GLY	MET	VAL	LEU	SER	GLY	TRP	SER	ALA

1	GLY	PRO	LEU	GLY	SER	SER	GLU	THR	PRO	LEU
2	LEU	LEU	GLU	VAL	ASN	THR	LYS	THR	THR	LYS
3	LEU	ARG	GLU	VAL	ILE	GLU	LYS	ILE	ILE	LYS
4	SER	LYS	LEU	GLY	MET	ASN	LEU	PRO	LEU	VAL
5	MET	ILE	GLY	SER	THR	LEU	VAL	PHE	GLU	ASP
6	GLY	GLU	GLY	LEU	GLU	GLU	ASP	GLU	ALA	ALA
7	ASN	TYR	ALA	LEU	ASN	LEU	GLU	LYS	VAL	LEU
8	ALA	GLU	LEU	PRO	ALA	PRO	VAL	VAL	ASN	ASP
9	THR	LYS	LEU	THR	VAL	GLU	ASP	PHE	GLN	GLN
10	GLU	LEU	SER	CYS	SER	ILE	ASN	ILE	LYS	HIS
11	ARG	ASP	GLU	PHE	ASP	GLU	GLU	LYS	GLU	PRO
12	ASP	GLY	MET	VAL	LEU	SER	GLY	TRP	SER	ALA