BMRB Entry 11346

Name: Solution structure of Fn14 CRD domain
Published: 2011-09-07

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PDB ID: 2rpj
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11346
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of Fn14 CRD domain

Deposition date:

2010-09-07

Original release date:

2011-09-07

Authors:

He, F.; Dang, W.; Muto, Y.; Inoue, M.; Kigawa, T.; Shirouzu, M.; Terada, T.; Yokoyama, S.

Citation:

Citation: He, Fahu; Dang, Weirong; Saito, Kohei; Watanabe, Satoru; Kobayashi, Naohiro; Guntert, Peter; Kigawa, Takanori; Tanaka, Akiko; Muto, Yutaka; Yokoyama, Shigeyuki. "Solution structure of the cysteine-rich domain in Fn14, a member of the tumor necrosis factor receptor superfamily." Protein Sci. 18, 650-656 (2009).
PubMed: 19241374

Assembly members:

Assembly members:
CRD domain, UNP residues 28-70, polymer, 50 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: cell free synthesis Host organism: E. coli - cell free Vector: P060919-17

Entity Sequences (FASTA):

Entity Sequences (FASTA):
CRD domain, UNP residues 28-70: GSSGSSGEQAPGTAPCSRGS SWSADLDKCMDCASCRARPH SDFCLGCAAA

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	161
15N chemical shifts	40
1H chemical shifts	242

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	CRD domain, UNP residues 28-70	1

Entities:

Entity 1, CRD domain, UNP residues 28-70 50 residues - Formula weight is not available

1	GLY	SER	SER	GLY	SER	SER	GLY	GLU	GLN	ALA
2	PRO	GLY	THR	ALA	PRO	CYS	SER	ARG	GLY	SER
3	SER	TRP	SER	ALA	ASP	LEU	ASP	LYS	CYS	MET
4	ASP	CYS	ALA	SER	CYS	ARG	ALA	ARG	PRO	HIS
5	SER	ASP	PHE	CYS	LEU	GLY	CYS	ALA	ALA	ALA

Name	Sample	Sample state	Sample conditions
3D 1H-15N NOESY	sample_1	isotropic	condition_1
3D 1H-13C NOESY	sample_1	isotropic	condition_1

BMRB	17237
PDB	2EQP 2KMZ 2RPJ
DBJ	BAA94792 BAJ20302
GB	AAF69108 AAH02718 ABM83894 ABM87215 EAW85429
REF	NP_057723 XP_001089176 XP_001165479 XP_002826080 XP_003269240
SP	Q9NP84
AlphaFold	Q9NP84

BMRB Entry 11346

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	SER	SER	GLY	SER	SER	GLY	GLU	GLN	ALA
2	PRO	GLY	THR	ALA	PRO	CYS	SER	ARG	GLY	SER
3	SER	TRP	SER	ALA	ASP	LEU	ASP	LYS	CYS	MET
4	ASP	CYS	ALA	SER	CYS	ARG	ALA	ARG	PRO	HIS
5	SER	ASP	PHE	CYS	LEU	GLY	CYS	ALA	ALA	ALA

1	GLY	SER	SER	GLY	SER	SER	GLY	GLU	GLN	ALA
2	PRO	GLY	THR	ALA	PRO	CYS	SER	ARG	GLY	SER
3	SER	TRP	SER	ALA	ASP	LEU	ASP	LYS	CYS	MET
4	ASP	CYS	ALA	SER	CYS	ARG	ALA	ARG	PRO	HIS
5	SER	ASP	PHE	CYS	LEU	GLY	CYS	ALA	ALA	ALA

1	GLY	SER	SER	GLY	SER	SER	GLY	GLU	GLN	ALA
2	PRO	GLY	THR	ALA	PRO	CYS	SER	ARG	GLY	SER
3	SER	TRP	SER	ALA	ASP	LEU	ASP	LYS	CYS	MET
4	ASP	CYS	ALA	SER	CYS	ARG	ALA	ARG	PRO	HIS
5	SER	ASP	PHE	CYS	LEU	GLY	CYS	ALA	ALA	ALA