BMRB Entry 11279

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PDB ID: 2dzi
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11279
MolProbity Validation Chart

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Title:
2DZI/Solution Structure of the N-terminal Ubiquitin-like Domain in Human Ubiquitin-like Protein 4A (GDX)
Deposition date:
2010-08-09
Original release date:
2011-08-18
Authors:
Zhao, C.; Sato, M.; Koshiba, S.; Watanabe, S.; Harada, T.; Kigawa, T.; Yokoyama, S.
Citation:

Citation: Zhao, C.; Sato, M.; Koshiba, S.; Watanabe, S.; Harada, T.; Kigawa, T.; Yokoyama, S.. "2DZI/Solution Structure of the N-terminal Ubiquitin-like Domain in Human Ubiquitin-like Protein 4A (GDX)"  .

Assembly members:

Assembly members:
ubiquitin-like domain, polymer, 81 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: cell free synthesis   Host organism: E. coli - cell free   Vector: P060227-19

Entity Sequences (FASTA):

Entity Sequences (FASTA):
ubiquitin-like domain: GSSGSSGMQLTVKALQGREC SLQVPEDELVSTLKQLVSEK LNVPVRQQRLLFKGKALADG KRLSDYSIGPNSKLNLVVKP L

Data sets:
Data typeCount
13C chemical shifts347
15N chemical shifts81
1H chemical shifts571

Additional metadata:

  • Assembly
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Assembly:

Entity Assembly IDEntity NameEntity ID
1ubiquitin-like domain1

Entities:

Entity 1, ubiquitin-like domain 81 residues - Formula weight is not available

1   GLYSERSERGLYSERSERGLYMETGLNLEU
2   THRVALLYSALALEUGLNGLYARGGLUCYS
3   SERLEUGLNVALPROGLUASPGLULEUVAL
4   SERTHRLEULYSGLNLEUVALSERGLULYS
5   LEUASNVALPROVALARGGLNGLNARGLEU
6   LEUPHELYSGLYLYSALALEUALAASPGLY
7   LYSARGLEUSERASPTYRSERILEGLYPRO
8   ASNSERLYSLEUASNLEUVALVALLYSPRO
9   LEU

Related Database Links:

PDB 2DZI
DBJ BAG56766
EMBL CAH93235
GB AAA36790 AAA92650 AAH43346 AAH53589 ABZ10495
REF NP_001126901 NP_001164852 NP_001229350 NP_001253630 NP_055050
SP B0KWT6 B1MTV8 B7NZQ9 P11441 Q5R4T1
AlphaFold B0KWT6 B1MTV8 B7NZQ9 P11441 Q5R4T1

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks