BMRB Entry 11230

Name: Solution structure of the 6th Ig-like domain from human KIAA1556
Published: 2011-08-03

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PDB ID: 2e7b
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11230
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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of the 6th Ig-like domain from human KIAA1556

Deposition date:

2010-07-23

Original release date:

2011-08-03

Authors:

Qin, X.; Nagashima, T.; Hayashi, F.; Yokoyama, S.

Citation:

Citation: Qin, X.; Nagashima, T.; Hayashi, F.; Yokoyama, S.. "Solution structure of the 6th Ig-like domain from human KIAA1556" .

Assembly members:

Assembly members:
Ig-like domain, residues 8-97, polymer, 103 residues, Formula weight is not available

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: cell free synthesis Host organism: E. coli - cell free Vector: P051017-18

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Ig-like domain, residues 8-97: GSSGSSGPVRFQEALKDLEV LEGGAATLRCVLSSVAAPVK WCYGNNVLRPGDKYSLRQEG AMLELVVRNLRPQDSGRYSC SFGDQTTSATLTVTALPSGP SSG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	407
15N chemical shifts	94
1H chemical shifts	647

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Ig-like domain, residues 8-97	1

Entities:

Entity 1, Ig-like domain, residues 8-97 103 residues - Formula weight is not available

1

GLY

SER

GLY

SER

GLY

PRO

VAL

ARG

2

PHE

GLN

GLU

ALA

LEU

LYS

ASP

LEU

GLU

VAL

3

LEU

GLU

GLY

ALA

THR

LEU

ARG

CYS

4

VAL

LEU

SER

VAL

ALA

PRO

VAL

LYS

5

TRP

CYS

TYR

GLY

ASN

VAL

LEU

ARG

PRO

6

GLY

ASP

LYS

TYR

SER

LEU

ARG

GLN

GLU

GLY

7

ALA

MET

LEU

GLU

LEU

VAL

ARG

ASN

LEU

8

ARG

PRO

GLN

ASP

SER

GLY

ARG

TYR

SER

CYS

9

SER

PHE

GLY

ASP

GLN

THR

SER

ALA

THR

10

LEU

THR

VAL

THR

ALA

LEU

PRO

SER

GLY

PRO

11

SER

GLY

Samples:

sample_1: Ig-like domain, residues 8-97, [U-13C; U-15N], 0.39 mM; d-Tris-HCl 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 7.0; pressure: 1 atm; temperature: 293 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D 15N-separated NOESY	sample_1	isotropic	condition_1
3D 13C-separated NOESY	sample_1	isotropic	condition_1

Software:

VNMR v6.1C, Varian - collection

NMRPipe v20031121, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B.A. - data analysis

Kujira v0.9816, Kobayashi, N. - data analysis

CYANA v2.0.17, Guntert, P. - refinement, structure solution

NMR spectrometers:

Varian INOVA 900 MHz