BMRB Entry 11092

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PDB ID: 2efi
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11092
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of the chromo domain of Mortality factor 4-like protein 1 from human

Deposition date:

2010-01-18

Original release date:

2011-01-19

Authors:

Li, H.; Sato, M.; Tochio, N.; Tomizawa, T.; Koshiba, S.; Harada, T.; Watanabe, S.; Kigawa, T.; Yokoyama, S.

Citation:

Citation: Li, H.; Sato, M.; Tochio, N.; Tomizawa, T.; Koshiba, S.; Harada, T.; Watanabe, S.; Kigawa, T.; Yokoyama, S.. "Solution structure of the chromo domain of Mortality factor 4-like protein 1 from human" .

Assembly members:

Assembly members:
Chromo domain, polymer, 100 residues, Formula weight is not available

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: Cell free synthesis Host organism: E. coli - cell free Vector: P060522-07

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Chromo domain: GSSGSSGMAPKQDPKPKFQE GERVLCFHGPLLYEAKCVKV AIKDKQVKYFIHYSGWNKNW DEWVPESRVLKYVDTNLQKQ RELQKANQEQYAEGKMRGAA

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	439
15N chemical shifts	98
1H chemical shifts	692

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Chromo domain	1

Entities:

Entity 1, Chromo domain 100 residues - Formula weight is not available

1	GLY	SER	SER	GLY	SER	SER	GLY	MET	ALA	PRO
2	LYS	GLN	ASP	PRO	LYS	PRO	LYS	PHE	GLN	GLU
3	GLY	GLU	ARG	VAL	LEU	CYS	PHE	HIS	GLY	PRO
4	LEU	LEU	TYR	GLU	ALA	LYS	CYS	VAL	LYS	VAL
5	ALA	ILE	LYS	ASP	LYS	GLN	VAL	LYS	TYR	PHE
6	ILE	HIS	TYR	SER	GLY	TRP	ASN	LYS	ASN	TRP
7	ASP	GLU	TRP	VAL	PRO	GLU	SER	ARG	VAL	LEU
8	LYS	TYR	VAL	ASP	THR	ASN	LEU	GLN	LYS	GLN
9	ARG	GLU	LEU	GLN	LYS	ALA	ASN	GLN	GLU	GLN
10	TYR	ALA	GLU	GLY	LYS	MET	ARG	GLY	ALA	ALA

Name	Sample	Sample state	Sample conditions
3D 15N-separated NOESY	sample_1	isotropic	condition_1
3D 13C-separated NOESY	sample_1	isotropic	condition_1

PDB	2EFI 2F5K
DBJ	BAB30219 BAB58904 BAE00783 BAE26980 BAE27430
EMBL	CAB70879 CAI29614
GB	AAD20970 AAD29872 AAF29033 AAF80854 AAG17253
REF	NP_001011999 NP_001030525 NP_001032250 NP_001032253 NP_001127679
SP	Q5NVP9 Q6AYU1
TPG	DAA17605
AlphaFold	Q5NVP9 Q6AYU1

BMRB Entry 11092

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	SER	SER	GLY	SER	SER	GLY	MET	ALA	PRO
2	LYS	GLN	ASP	PRO	LYS	PRO	LYS	PHE	GLN	GLU
3	GLY	GLU	ARG	VAL	LEU	CYS	PHE	HIS	GLY	PRO
4	LEU	LEU	TYR	GLU	ALA	LYS	CYS	VAL	LYS	VAL
5	ALA	ILE	LYS	ASP	LYS	GLN	VAL	LYS	TYR	PHE
6	ILE	HIS	TYR	SER	GLY	TRP	ASN	LYS	ASN	TRP
7	ASP	GLU	TRP	VAL	PRO	GLU	SER	ARG	VAL	LEU
8	LYS	TYR	VAL	ASP	THR	ASN	LEU	GLN	LYS	GLN
9	ARG	GLU	LEU	GLN	LYS	ALA	ASN	GLN	GLU	GLN
10	TYR	ALA	GLU	GLY	LYS	MET	ARG	GLY	ALA	ALA

1	GLY	SER	SER	GLY	SER	SER	GLY	MET	ALA	PRO
2	LYS	GLN	ASP	PRO	LYS	PRO	LYS	PHE	GLN	GLU
3	GLY	GLU	ARG	VAL	LEU	CYS	PHE	HIS	GLY	PRO
4	LEU	LEU	TYR	GLU	ALA	LYS	CYS	VAL	LYS	VAL
5	ALA	ILE	LYS	ASP	LYS	GLN	VAL	LYS	TYR	PHE
6	ILE	HIS	TYR	SER	GLY	TRP	ASN	LYS	ASN	TRP
7	ASP	GLU	TRP	VAL	PRO	GLU	SER	ARG	VAL	LEU
8	LYS	TYR	VAL	ASP	THR	ASN	LEU	GLN	LYS	GLN
9	ARG	GLU	LEU	GLN	LYS	ALA	ASN	GLN	GLU	GLN
10	TYR	ALA	GLU	GLY	LYS	MET	ARG	GLY	ALA	ALA

1	GLY	SER	SER	GLY	SER	SER	GLY	MET	ALA	PRO
2	LYS	GLN	ASP	PRO	LYS	PRO	LYS	PHE	GLN	GLU
3	GLY	GLU	ARG	VAL	LEU	CYS	PHE	HIS	GLY	PRO
4	LEU	LEU	TYR	GLU	ALA	LYS	CYS	VAL	LYS	VAL
5	ALA	ILE	LYS	ASP	LYS	GLN	VAL	LYS	TYR	PHE
6	ILE	HIS	TYR	SER	GLY	TRP	ASN	LYS	ASN	TRP
7	ASP	GLU	TRP	VAL	PRO	GLU	SER	ARG	VAL	LEU
8	LYS	TYR	VAL	ASP	THR	ASN	LEU	GLN	LYS	GLN
9	ARG	GLU	LEU	GLN	LYS	ALA	ASN	GLN	GLU	GLN
10	TYR	ALA	GLU	GLY	LYS	MET	ARG	GLY	ALA	ALA