BMRB Entry 11038

Title:
The DNA binding domain of RTBP1
Deposition date:
2008-03-22
Original release date:
2009-04-29
Authors:
Lee, Weontae; Ko, Sunggeon
Citation:

Citation: Ko, Sunggeon; Yu, Eun Young; Shin, Joon; Yoo, Hyun Hee; Tanaka, Toshiyuki; Kim, Woo Taek; Cho, Hyun-Soo; Lee, Weontae; Chung, In Kwon. "Solution structure of the DNA binding domain of rice telomere binding protein RTBP1"  Biochemistry 48, 827-838 (2009).
PubMed: 19152316

Assembly members:

Assembly members:
The DNA binding domain of RTBP1, polymer, 122 residues, 13862.927 Da.

Natural source:

Natural source:   Common Name: Oryza sativa   Taxonomy ID: 4530   Superkingdom: Eukaryota   Kingdom: Viridiplantae   Genus/species: Oryza sativa

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: PGEX 4T-1

Entity Sequences (FASTA):

Data sets:
Data typeCount
13C chemical shifts409
15N chemical shifts113
1H chemical shifts678

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1The DNA binding domain of RTBP11

Entities:

Entity 1, The DNA binding domain of RTBP1 122 residues - 13862.927 Da.

First G and S and "VDSSGRIVTL" in C-terminal were from cloining artifacts.

1   GLYSERPROPHEALAASPPROASNSERLEU
2   ALALEUALAASNVALPROLEUSERARGSER
3   LYSARGPROASPPHEGLYGLNARGARGILE
4   ARGARGPROPHETHRVALALAGLUVALGLU
5   LEULEUVALGLUALAVALGLUHISLEUGLY
6   THRGLYARGTRPARGASPVALLYSPHEARG
7   ALAPHEGLUASNVALHISHISARGTHRTYR
8   VALASPLEULYSASPLYSTRPLYSTHRLEU
9   VALHISTHRALASERILEALAPROGLNGLN
10   ARGARGGLYALAPROVALPROGLNGLULEU
11   LEUASPARGVALLEUALAALAGLNALATYR
12   TRPSERVALASPSERSERGLYARGILEVAL
13   THRLEU

Related Database Links:

PDB 2ROH
GB AAF97508 EAY88030 EAZ25089
SP Q9LL45
AlphaFold Q9LL45

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks