BMRB Entry 10281

Name: Solution structure of the homeobox domain of the human paired box protein Pax-6
Published: 2009-12-17

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PDB ID: 2cue
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR10281
MolProbity Validation Chart

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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of the homeobox domain of the human paired box protein Pax-6

Deposition date:

2008-12-17

Original release date:

2009-12-17

Authors:

Ohnishi, S.; Kigawa, T.; Tochio, N.; Tomizawa, T.; Koshiba, S.; Inoue, M.; Yokoyama, S.

Citation:

Citation: Ohnishi, S.; Kigawa, T.; Tochio, N.; Tomizawa, T.; Koshiba, S.; Inoue, M.; Yokoyama, S.. "Solution structure of the homeobox domain of the human paired box protein Pax-6" .

Assembly members:

Assembly members:
homeobox domain, polymer, 80 residues, Formula weight is not available

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: cell free synthesis Vector: P040712-10

Entity Sequences (FASTA):

Entity Sequences (FASTA):
homeobox domain: GSSGSSGQRNRTSFTQEQIE ALEKEFERTHYPDVFARERL AAKIDLPEARIQVWFSNRRA KWRREEKLRNQRRQSGPSSG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	316
15N chemical shifts	70
1H chemical shifts	485

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	homeobox domain	1

Entities:

Entity 1, homeobox domain 80 residues - Formula weight is not available

1	GLY	SER	SER	GLY	SER	SER	GLY	GLN	ARG	ASN
2	ARG	THR	SER	PHE	THR	GLN	GLU	GLN	ILE	GLU
3	ALA	LEU	GLU	LYS	GLU	PHE	GLU	ARG	THR	HIS
4	TYR	PRO	ASP	VAL	PHE	ALA	ARG	GLU	ARG	LEU
5	ALA	ALA	LYS	ILE	ASP	LEU	PRO	GLU	ALA	ARG
6	ILE	GLN	VAL	TRP	PHE	SER	ASN	ARG	ARG	ALA
7	LYS	TRP	ARG	ARG	GLU	GLU	LYS	LEU	ARG	ASN
8	GLN	ARG	ARG	GLN	SER	GLY	PRO	SER	SER	GLY

Name	Sample	Sample state	Sample conditions
3D 13C-separated NOESY	sample_1	isotropic	condition_1
3D 15N-separated NOESY	sample_1	isotropic	condition_1

PDB	2CUE
DBJ	BAA20936 BAA23004 BAA24024 BAB62531 BAC25729
EMBL	CAA04395 CAA11364 CAA11365 CAA11366 CAA11367
GB	AAA36416 AAA40109 AAA59962 AAB05932 AAB07733
PIR	S37689
PRF	1717390A 1902328A 1911405A
REF	NP_000271 NP_001006763 NP_001035735 NP_001075686 NP_001079413
SP	O73917 P26367 P26630 P47237 P47238
TPG	DAA21851
AlphaFold	O73917 P26367 P26630 P47237 P47238

BMRB Entry 10281

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	SER	SER	GLY	SER	SER	GLY	GLN	ARG	ASN
2	ARG	THR	SER	PHE	THR	GLN	GLU	GLN	ILE	GLU
3	ALA	LEU	GLU	LYS	GLU	PHE	GLU	ARG	THR	HIS
4	TYR	PRO	ASP	VAL	PHE	ALA	ARG	GLU	ARG	LEU
5	ALA	ALA	LYS	ILE	ASP	LEU	PRO	GLU	ALA	ARG
6	ILE	GLN	VAL	TRP	PHE	SER	ASN	ARG	ARG	ALA
7	LYS	TRP	ARG	ARG	GLU	GLU	LYS	LEU	ARG	ASN
8	GLN	ARG	ARG	GLN	SER	GLY	PRO	SER	SER	GLY

1	GLY	SER	SER	GLY	SER	SER	GLY	GLN	ARG	ASN
2	ARG	THR	SER	PHE	THR	GLN	GLU	GLN	ILE	GLU
3	ALA	LEU	GLU	LYS	GLU	PHE	GLU	ARG	THR	HIS
4	TYR	PRO	ASP	VAL	PHE	ALA	ARG	GLU	ARG	LEU
5	ALA	ALA	LYS	ILE	ASP	LEU	PRO	GLU	ALA	ARG
6	ILE	GLN	VAL	TRP	PHE	SER	ASN	ARG	ARG	ALA
7	LYS	TRP	ARG	ARG	GLU	GLU	LYS	LEU	ARG	ASN
8	GLN	ARG	ARG	GLN	SER	GLY	PRO	SER	SER	GLY

1	GLY	SER	SER	GLY	SER	SER	GLY	GLN	ARG	ASN
2	ARG	THR	SER	PHE	THR	GLN	GLU	GLN	ILE	GLU
3	ALA	LEU	GLU	LYS	GLU	PHE	GLU	ARG	THR	HIS
4	TYR	PRO	ASP	VAL	PHE	ALA	ARG	GLU	ARG	LEU
5	ALA	ALA	LYS	ILE	ASP	LEU	PRO	GLU	ALA	ARG
6	ILE	GLN	VAL	TRP	PHE	SER	ASN	ARG	ARG	ALA
7	LYS	TRP	ARG	ARG	GLU	GLU	LYS	LEU	ARG	ASN
8	GLN	ARG	ARG	GLN	SER	GLY	PRO	SER	SER	GLY