BMRB Entry 10062

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR10062

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Title:
Backbone 1H and 15N Chemical Shift Assignments for Nedd8
Deposition date:
2006-12-07
Original release date:
2007-03-23
Authors:
Sakata, Eri; Yamaguchi, Yoshiki; Miyauchi, Yasuhiro; Iwai, Kazuhiro; Chiba, Tomoki; Saeki, Yasusi; Matsuda, Noriyuki; Tanaka, Keiji; Kato, Koichi
Citation:

Citation: Sakata, Eri; Yamaguchi, Yoshiki; Miyauchi, Yasuhiro; Iwai, Kazuhiro; Chiba, Tomoki; Saeki, Yasusi; Matsuda, Noriyuki; Tanaka, Keiji; Kato, Koichi. "Direct interactions between Nedd8 and ubiquitin E2 conjugating enzymes upregulate cullin-based E3 ligase activity"  Nat. Struct. Mol. Biol. 14, 167-168 (2007).
PubMed: 17206147

Assembly members:

Assembly members:
Nedd8, polymer, 96 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Nedd8: MGSSHHHHHHSSGLVPRGSH MLIKVKTLTGKEIEIDIEPT DKVERIKERVEEKEGIPPQQ QRLIYSGKQMNDEKTAADYK ILGGSVLHLVLALRGG

Data sets:
  • assigned_chemical_shifts
Data typeCount
15N chemical shifts72
1H chemical shifts72

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1Nedd8 monomer1

Entities:

Entity 1, Nedd8 monomer 96 residues - Formula weight is not available

1   METGLYSERSERHISHISHISHISHISHIS
2   SERSERGLYLEUVALPROARGGLYSERHIS
3   METLEUILELYSVALLYSTHRLEUTHRGLY
4   LYSGLUILEGLUILEASPILEGLUPROTHR
5   ASPLYSVALGLUARGILELYSGLUARGVAL
6   GLUGLULYSGLUGLYILEPROPROGLNGLN
7   GLNARGLEUILETYRSERGLYLYSGLNMET
8   ASNASPGLULYSTHRALAALAASPTYRLYS
9   ILELEUGLYGLYSERVALLEUHISLEUVAL
10   LEUALALEUARGGLYGLY

Related Database Links:

PDB 1NDD 1R4M 1R4N 1XT9 2BKR 2KO3 2NVU 4F8C 4FBJ 4HCP 4P5O
DBJ BAA01719 BAA04889 BAE27394 BAE27660 BAE34759
EMBL CAF89342 CAF97715 CAG05755 CAG28590 CAJ82981
GB AAC64189 AAF73911 AAH04625 AAH55645 AAH76245
REF NP_001002557 NP_001016973 NP_001075681 NP_001154087 NP_001187300
SP P29595 P61282 Q15843 Q4PLJ0 Q71UE8
TPG DAA25711
AlphaFold P29595 P61282 Q15843 Q4PLJ0 Q71UE8

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks