BMRB Entry 10037

Name: Solution structure of the third mbt domain from human KIAA1798 protein
Published: 2008-08-13

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PDB ID: 1wjq
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR10037
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of the third mbt domain from human KIAA1798 protein

Deposition date:

2006-11-02

Original release date:

2008-08-13

Authors:

Tomizawa, T.; Kigawa, T.; Koshiba, S.; Inoue, M.; Yokoyama, S.

Citation:

Citation: Tomizawa, T.; Kigawa, T.; Koshiba, S.; Inoue, M.; Yokoyama, S.. "Solution structure of the third mbt domain from human KIAA1798 protein" .

Assembly members:

Assembly members:
mbt domain, polymer, 107 residues, Formula weight is not available

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: cell free synthesis Vector: P040119-32

Entity Sequences (FASTA):

Entity Sequences (FASTA):
mbt domain: GSSGSSGVKPPHGFQKKMKL EVVDKRNPMFIRVATVADTD DHRVKVHFDGWNNCYDYWID ADSPDIHPVGWCSKTGHPLQ PPLSPLELMEASEHGGCSTP GSGPSSG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	439
15N chemical shifts	94
1H chemical shifts	656

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	KIAA1798 protein	1

Entities:

Entity 1, KIAA1798 protein 107 residues - Formula weight is not available

1

GLY

SER

GLY

SER

GLY

VAL

LYS

PRO

2

PRO

HIS

GLY

PHE

GLN

LYS

MET

LYS

LEU

3

GLU

VAL

ASP

LYS

ARG

ASN

PRO

MET

PHE

4

ILE

ARG

VAL

ALA

THR

VAL

ALA

ASP

THR

ASP

5

ASP

HIS

ARG

VAL

LYS

VAL

HIS

PHE

ASP

GLY

6

TRP

ASN

CYS

TYR

ASP

TYR

TRP

ILE

ASP

7

ALA

ASP

SER

PRO

ASP

ILE

HIS

PRO

VAL

GLY

8

TRP

CYS

SER

LYS

THR

GLY

HIS

PRO

LEU

GLN

9

PRO

LEU

SER

PRO

LEU

GLU

LEU

MET

GLU

10

ALA

SER

GLU

HIS

GLY

CYS

SER

THR

PRO

11

GLY

SER

GLY

PRO

SER

GLY

Samples:

sample_1: mbt domain, [U-13C; U-15N], 1.18 mM; d-Tris-HCl 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 7.0; pressure: 1 atm; temperature: 296 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D 13C-separated NOESY	sample_1	not available	condition_1
3D 15N-separated NOESY	sample_1	not available	condition_1

Software:

xwinnmr v2.6, Bruker - collection

NMRPipe v20030801, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B. A. - data analysis

Kujira v0.901, Kobayashi, N. - data analysis

CYANA v2.0.17, Guntert, P. - refinement, structure solution

NMR spectrometers:

Bruker AVANCE 800 MHz