BMRB Entry 7396

Name: Solution Structure of ETO-TAFH refined in explicit solvent
Published: 2008-06-17

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PDB ID: 2pp4
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7396
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution Structure of ETO-TAFH refined in explicit solvent

Deposition date:

2007-06-29

Original release date:

2008-06-17

Authors:

Wei, Y.; Liu, S.; Lausen, J.; Woodrell, C.; Cho, S.; Biris, N.; Kobayashi, N.; Yokoyama, S.; Werner, M.

Citation:

Citation: Wei, Y.; Liu, S.; Lausen, J.; Woodrell, C.; Cho, S.; Biris, N.; Kobayashi, N.; Wei, Y.; Yokoyama, S.; Werner, M.. "A TAF4-homology domain from the corepressor ETO is a docking platform for positive and negative regulators of transcription" Nat. Struct. Mol. Biol. 14, 653-661 (2007).
PubMed: 17572682

Assembly members:

Assembly members:
Protein_ETO, polymer, 107 residues, Formula weight is not available

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Protein_ETO: GARQLSKLKRFLTTLQQYGN DISPEIGERVRTLVLGLVNS TLTIEEFHSKLQEATNFPLR PFVIPFLKANLPLLQRELLH CARLAKQNPAQYLAQHEQLL LDASTTS

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	388
15N chemical shifts	111
1H chemical shifts	802

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	ETO	1

Entities:

Entity 1, ETO 107 residues - Formula weight is not available

1

GLY

ALA

ARG

GLN

LEU

SER

LYS

LEU

LYS

ARG

2

PHE

LEU

THR

LEU

GLN

TYR

GLY

ASN

3

ASP

ILE

SER

PRO

GLU

ILE

GLY

GLU

ARG

VAL

4

ARG

THR

LEU

VAL

LEU

GLY

LEU

VAL

ASN

SER

5

THR

LEU

THR

ILE

GLU

PHE

HIS

SER

LYS

6

LEU

GLN

GLU

ALA

THR

ASN

PHE

PRO

LEU

ARG

7

PRO

PHE

VAL

ILE

PRO

PHE

LEU

LYS

ALA

ASN

8

LEU

PRO

LEU

GLN

ARG

GLU

LEU

HIS

9

CYS

ALA

ARG

LEU

ALA

LYS

GLN

ASN

PRO

ALA

10

GLN

TYR

LEU

ALA

GLN

HIS

GLU

GLN

LEU

11

LEU

ASP

ALA

SER

THR

SER

Samples:

sample: ETO 1.1 mM; phosphate buffer 200 mM; H2O 95%; D2O 5%

sample_conditions_1: pH: 6.8; pressure: 1 .; temperature: 293 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D_15N-separated_NOESY	sample	isotropic	sample_conditions_1
3D_13C-separated_NOESY	sample	isotropic	sample_conditions_1

Software:

X-PLOR NIH v2.14, Schwieters, C.D. - refinement

NMR spectrometers:

Bruker AVANCE 800 MHz
Bruker AVANCE 900 MHz

BMRB	16467 7147
PDB	2H7B 2KNH 2PP4
DBJ	BAA03089 BAA03247 BAA03558 BAA03559 BAA03560
EMBL	CAA56311 CAF99400 CAG33073
GB	AAB34819 AAB34820 AAC28931 AAC28932 AAC28933
REF	NP_001070244 NP_001089065 NP_001102127 NP_001104496 NP_001104497
SP	Q06455 Q61909
AlphaFold	Q06455 Q61909