BMRB Entry 7121
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7121
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Zhang, Q.; Liu, G.; Shastry, R.; Jiang, M.; Cunningham, K.; Ma, L.; Xiao, R.; Acton, T.; Montelione, G.; Szyperski, T.. "Solution Structure of UPF0301 protein HD_1794" .
Assembly members:
UPF0301 protein HD_1794, polymer, 188 residues, Formula weight is not available
Natural source: Common Name: Haemophilus ducreyi Taxonomy ID: 730 Superkingdom: Eubacteria Kingdom: not available Genus/species: Haemophilus ducreyi
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
UPF0301 protein HD_1794: MFGNLQGKFIIATPEMDDEY
FDRTVIYICEHNDNGTIGVI
INTPTDLSVLELLTRMDFQM
AKPRIYTQDQMVLNGGPVNQ
DRGFIVHSKTDHEFTHSYKV
TDDITLTTSGDVLDSFGTQT
APEKFIVCLGCSTWKPHQLE
QEIAQNYWLLSEANNQTLFE
TSYLDRWVEANEMLGISGIL
APAGRALE
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 564 |
| 15N chemical shifts | 156 |
| 1H chemical shifts | 1156 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | UPF0301 protein HD_1794 | 1 |
Entities:
Entity 1, UPF0301 protein HD_1794 188 residues - Formula weight is not available
| 1 | MET | PHE | GLY | ASN | LEU | GLN | GLY | LYS | PHE | ILE | ||||
| 2 | ILE | ALA | THR | PRO | GLU | MET | ASP | ASP | GLU | TYR | ||||
| 3 | PHE | ASP | ARG | THR | VAL | ILE | TYR | ILE | CYS | GLU | ||||
| 4 | HIS | ASN | ASP | ASN | GLY | THR | ILE | GLY | VAL | ILE | ||||
| 5 | ILE | ASN | THR | PRO | THR | ASP | LEU | SER | VAL | LEU | ||||
| 6 | GLU | LEU | LEU | THR | ARG | MET | ASP | PHE | GLN | MET | ||||
| 7 | ALA | LYS | PRO | ARG | ILE | TYR | THR | GLN | ASP | GLN | ||||
| 8 | MET | VAL | LEU | ASN | GLY | GLY | PRO | VAL | ASN | GLN | ||||
| 9 | ASP | ARG | GLY | PHE | ILE | VAL | HIS | SER | LYS | THR | ||||
| 10 | ASP | HIS | GLU | PHE | THR | HIS | SER | TYR | LYS | VAL | ||||
| 11 | THR | ASP | ASP | ILE | THR | LEU | THR | THR | SER | GLY | ||||
| 12 | ASP | VAL | LEU | ASP | SER | PHE | GLY | THR | GLN | THR | ||||
| 13 | ALA | PRO | GLU | LYS | PHE | ILE | VAL | CYS | LEU | GLY | ||||
| 14 | CYS | SER | THR | TRP | LYS | PRO | HIS | GLN | LEU | GLU | ||||
| 15 | GLN | GLU | ILE | ALA | GLN | ASN | TYR | TRP | LEU | LEU | ||||
| 16 | SER | GLU | ALA | ASN | ASN | GLN | THR | LEU | PHE | GLU | ||||
| 17 | THR | SER | TYR | LEU | ASP | ARG | TRP | VAL | GLU | ALA | ||||
| 18 | ASN | GLU | MET | LEU | GLY | ILE | SER | GLY | ILE | LEU | ||||
| 19 | ALA | PRO | ALA | GLY | ARG | ALA | LEU | GLU |
Samples:
sample_1: UPF0301 protein HD_1794 mM; MES 50 mM; DTT 10 mM; Arginine 50 mM; NaN3 0.02%; H2O 95%; D2O 5%
sample_cond_1: pH: 6.0; pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| GFT (4,3)D HNNCABCA | sample_1 | not available | sample_cond_1 |
| GFT (4,3)D CABCA(CO)NHN | sample_1 | not available | sample_cond_1 |
| GFT (4,3)D HABCAB(CO)NHN | sample_1 | not available | sample_cond_1 |
| GFT (4,3)D HCCH | sample_1 | not available | sample_cond_1 |
| SIMULTANEOUS HETERONUCLEAR RESOLVED [1H,1H]-NOESY | sample_1 | not available | sample_cond_1 |
Software:
DYANA v1.5 - structure solution
CYANA v2.1 - structure solution
NMRPipe v2.3 - processing
CNS v1.1 - refinement
XEASY v1.3 - data analysis
UBNMR v1.0 - data analysis
AutoStruct v2.0.0 - data analysis
NMR spectrometers:
- Varian INOVA 750 MHz
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks