BMRB Entry 5656

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5656

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Title:
Resonance Assignments for the Z Domain of Staphylococcal Protein A using a 2H, 13C, 15N enriched, selective methyl protonated sample
Deposition date:
2003-01-09
Original release date:
2005-05-03
Authors:
Zheng, Deyou; Swapna, G.V.T.; Hunter, Moseley; Montelione, Gaetano
Citation:

Citation: Zheng, D.; Aramini, J.; Montelione, G.. "Validation of helical tilt angles in the solution NMR structure of the Z domain of Staphylococcal protein A by combined analysis of residual dipolar coupling and NOE data."  Protein Sci. 13, 549-554 (2004).
PubMed: 14718654

Assembly members:

Assembly members:
staphylococcal protein A Z domain, polymer, 71 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: S. aureus   Taxonomy ID: 1280   Superkingdom: Eubacteria   Kingdom: not available   Genus/species: Staphylococcus aureus

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
staphylococcal protein A Z domain: KAIFVLNAQHDEAVDNKFNK EQQNAFYEILHLPNLNEEQR NAFIQSLKDDPSQSANLLAE AKKLNDAQAPK

Data sets:
Data typeCount
1H chemical shifts168
13C chemical shifts235
15N chemical shifts83

Time Domain Data

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1staphylococcal protein A Z domain1

Entities:

Entity 1, staphylococcal protein A Z domain 71 residues - Formula weight is not available

1   LYSALAILEPHEVALLEUASNALAGLNHIS
2   ASPGLUALAVALASPASNLYSPHEASNLYS
3   GLUGLNGLNASNALAPHETYRGLUILELEU
4   HISLEUPROASNLEUASNGLUGLUGLNARG
5   ASNALAPHEILEGLNSERLEULYSASPASP
6   PROSERGLNSERALAASNLEULEUALAGLU
7   ALALYSLYSLEUASNASPALAGLNALAPRO
8   LYS

Samples:

sample_one: staphylococcal protein A Z domain, [U-13C; U-15N; U-2H] with Val, Leu, Ile(delta) methyl protonated, 1.1 mM

sample_conditions_one: pH: 6.5; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions
1H-15N HSQCnot availablenot availablenot available
1H-13C HSQCnot availablenot availablenot available
HNCOnot availablenot availablenot available
HN(CA)COnot availablenot availablenot available
HNCACBnot availablenot availablenot available
HN(CO)CACBnot availablenot availablenot available
H(CCCO)NH-TOCSYnot availablenot availablenot available
(H)CC(CO)NH-TOCSYnot availablenot availablenot available

Software:

AutoAssign v1.9 - automated backbone assignments

NMR spectrometers:

  • Varian INOVA 600 MHz

Related Database Links:

BMRB 19043 4023
PDB
DBJ BAC76617 BAC76619 BAL27690 BAL27694 BAL27697
EMBL CAA49867 CAA65431
GB AAA72944 AAB00807 AAR10383 AAR10384 AAR10385
REF WP_000298178 WP_000298179 WP_000316486 WP_000363686 WP_000496862

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks